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Application Stories

Exiqon GenEx qPCR analysis software

Exiqon has worked together with MultiD Analyses to generate a version of the qPCR GenEx analysis software specially adapted for Exiqon's microRNA qPCR platform. Import qPCR data fast and easy using the new Exiqon qPCR plate wizard. Download a 14 day free trial today and use our step-by-step guide to get started with your qPCR data analysis.

Exiqon, now a QIAGEN company

Exiqon and QIAGEN have joined forces to bring you an enriched product and service offering that builds on the expertise and product synergies of the two companies.

As of 1 October 2017, Exiqon products and services are fully integrated with QIAGEN, and available for purchase only through QIAGEN. This website will redirect you to the relevant pages on qiagen.com.
  • Comprehensive pre-processing of qPCR data – including inter-plate calibration, outlier detection and efficiency correction
  • Fast and easy qPCR data import using exclusive wizard – Ideal for high throughput analysis
  • Convenient selection of reference genes using GeNorm and Normfinder
  • Straightforward normalization using reference genes or global mean
  • Advanced statistical analysis available at the click of a button
  • Publication ready plots and graphs
  • Detailed manual and online help available from experts
  • Flexible license options - 6 or 12 months as well as perpetual license available
  • Site license available

Comprehensive and easy-to-use qPCR data analysis

Exiqon has partnered with MultiD to provide a software for qPCR data analysis specifically adapted to our miRCURY LNA™ Universal RT microRNA PCR products. Exiqon GenEx combines advanced qPCR data analysis with a user-friendly streamlined workflow. It can be used for any qPCR data analysis, including both relative and absolute quantification experiments.

Exiqon GenEx contains all functionalities you need to analyze and visualize your qPCR data (Figure 1):
  • Direct import of data through the Exiqon qPCR plate import wizard
    • Import hundreds of instrument export files (qPCR data files) within minutes
  • Data pre-processing for optimal normalization and data handling enabling
    • Easy removal of microRNAs not expressed in the study
    • Quality check of the spike-in values across samples
    • Easy sorting of assays
    • Assay-specific cut-off based on negative control samples
    • Normalization to global mean of all assays expressed below a set cut-off
    • Simplified selection of reference genes using classifier
  • Comprehensive statistical analyses
    • Publication-ready heat-maps and PCA plots generated in a just a few simple clicks
See a complete list of features (.pdf)

Easy import of data from Exiqon’s PCR panels

The Exiqon GenEx software offers fast and easy import of data from any miRCURY LNA™ Universal RT microRNA PCR panel. Using the new Exiqon qPCR plate import wizard , instrument files can be imported and merged in minutes. Just activate the wizard and select your Exiqon qPCR panel, e.g., Human microRNA PCR Panel I+II and upload your data file.

In addition, the wizard tool makes designing your PCR experiment and classifying your data fast and straightforward. Exiqon’s qPCR plate import wizard is available exclusively with the Exiqon GenEx software.

Together with our Step-by-step guide to data analysis , GenEx ensures that you get the most out of your qPCR data.

Exiqon GenEx product coverage:

Exiqon GenEx Professional: The complete software for direct instrument export file upload via the Exiqon qPCR plate import wizard, all unique data pre-processing tools and classification methods. It further includes many data presentation tools and simple and advanced statistical analysis functionalities. Enables high-throughput analysis of qPCR data and imports several hundreds of instrument export files within a few minutes. The license is for one PC for perpetual use or time limited depending on product.

Exiqon GenEx Enterprise: Includes all the features and functionalities of the Exiqon GenEx Professional as well as additional advanced statistical analyses and expression profiling analyses. The license is for one PC for perpetual use or time limited depending on product.

View comparison between the versions (.pdf)

A USB license key is available allowing Exiqon GenEx software access from an unlimited number of PCs, one user at the time. Install the software on several computers and connect the USB key to the one you are planning on using with the program. A valid license for GenEx Pro or GenEx Enterprise is required for purchases of USB keys.

Please contact us for information about a server-based site license.

6 months 12 months Unlimited Site license USB
Pro 207026 207030 207014 207035 207033
Enterprise 207028 207032 207016 207037 207040

6 months 12 months Unlimited Site license USB
Pro 207025 207029 207013 207034 207033
Enterprise 207027 207031 207015 207036 207040

Excellent data pre-processing

One of the most important parts of a qPCR experiment is the pre-processing of raw data for subsequent statistical analysis. Pre-processing needs to be performed with consistence, in the correct order and with confidence. GenEx has a streamlined and user-friendly interface which aids data handling.

For accurate and robust normalization of qPCR data, GenEx has the advantage of incorporating both NormFinder and GeNorm in the software. Thus, you get two algorithms on which to base your choice of reference genes in one software installation. Normalization to multiple reference genes or to global mean expression is done by the click of a button.

Comprehensive statistical analyses

GenEx also offers advanced statistical solutions for post-normalization data analysis. Powerful presentation tools facilitate the generation of professional illustrations of even the most complex experimental designs. Current features include parametric and non-parametric statistical tests, clustering methods, principal component analysis, artificial neural networks, and much more. View a complete list of features.

Figure 1 Exiqon GenEx workflow.
Exiqon GenEx workflow. (Click to learn more)

Figure 2 Easy import of qPCR data
Easy import of qPCR data. (Click to learn more)

System requirements for GenEx:

  • Platforms Supported *: Windows® Xp/Vista/7
  • Minimum: 700 MHz AMD® /Intel® CPU, 512 MB RAM
  • Recommended: 1600 MHz or faster AMD® /Intel® CPU, 1024 or more MB RAM
* Use of GenEx on Mac OS X requires a Windows Emulator

Get started with the Exiqon GenEx software

In order for you to experience the power and convenience of qPCR data analysis using GenEx, we offer a free 14 day trial of the software.

Click on the link below to be taken to a download page.

To purchase a license for Exiqon GenEx, please use the webshop and select the license type you require.

Once you confirm your order, you will receive a license key by email within 5 business days.
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